Gene detail information of Glyur000637s00026816 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40815.1 | 7.00E-46 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | XP_004490527.1 | 1.20E-153 | PREDICTED: uncharacterized protein LOC101506482 [Cicer arietinum] |
| trEMBL | tr|G7K645|G7K645_MEDTR | 9.00E-143 | C2 domain protein {ECO:0000313|EMBL:AES98429.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00637 | 110094 | 111760 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.572 |
| SRR1783600 | control | 19.327 |
| SRR1783602 | moderate drought stress | 31.797 |
| SRR1811619 | moderate drought stress | 32.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.015 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.916 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.502 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.400 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.907 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.129 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.412 |
| SRR2868004 | Drought Stress (root) | 5.946 |
| SRR2967015 | Control (root) | 6.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.352 |
| SRR9715740 | Leaf | 1.265 |
| SRR9715741 | Leaf | 5.420 |
| SRR9715739 | Root | 21.103 |
| SRR9715742 | Root | 8.476 |
| SRR9715743 | Root | 9.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.488 |
| SRR8749028 | MeJA induced 9h | 13.275 |
| SRR8749029 | MeJA induced 9h | 14.357 |
| SRR8749030 | Uninduced | 3.842 |
| SRR8749031 | Uninduced | 1.493 |
| SRR8749032 | Uninduced | 2.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.379 |
| SRR8400027 | Control - Root | 15.565 |