Gene detail information of Glyur000637s00026812 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27870.1 | 9.00E-39 | Vacuolar iron transporter (VIT) family protein |
| NR | XP_003615476.1 | 0 | Integral membrane protein-like protein [Medicago truncatula] |
| Swissprot | tr|Q8LPT3|MEBL_ARATH | 3.00E-40 | Membrane protein of ER body-like protein |
| trEMBL | tr|G7K650|G7K650_MEDTR | 0 | Vacuolar iron transporter-like protein {ECO:0000313|EMBL:AES98434.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00637 | 82541 | 89195 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.549 |
| SRR1783600 | control | 1.644 |
| SRR1783602 | moderate drought stress | 1.788 |
| SRR1811619 | moderate drought stress | 1.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.866 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.922 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.435 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.459 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.772 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.710 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.703 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.757 |
| SRR2868004 | Drought Stress (root) | 11.824 |
| SRR2967015 | Control (root) | 8.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.307 |
| SRR9715740 | Leaf | 11.371 |
| SRR9715741 | Leaf | 10.354 |
| SRR9715739 | Root | 0.250 |
| SRR9715742 | Root | 2.184 |
| SRR9715743 | Root | 1.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.220 |
| SRR8749028 | MeJA induced 9h | 6.992 |
| SRR8749029 | MeJA induced 9h | 2.087 |
| SRR8749030 | Uninduced | 4.091 |
| SRR8749031 | Uninduced | 2.715 |
| SRR8749032 | Uninduced | 2.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.634 |
| SRR8400027 | Control - Root | 8.208 |