Gene detail information of Glyur000637s00026808 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24600.1 | 6.00E-81 | Protein of unknown function, DUF599 |
| NR | KHN40019.1 | 2.52E-153 | hypothetical protein glysoja_009396 [Glycine soja] |
| COG | YP_003443410.1 | 8.00E-32 | hypothetical protein Alvin_1443 [Allochromatium vinosum DSM 180] |
| trEMBL | tr|I1MB64|I1MB64_SOYBN | 5.00E-152 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G36770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00637 | 48334 | 49850 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000637s00026808.1 | PF04654.7 | DUF599 | 9 | 219 | 2.50E-64 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.124 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.123 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.159 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.021 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.025 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.644 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.850 |
| SRR2868004 | Drought Stress (root) | 3.203 |
| SRR2967015 | Control (root) | 2.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.277 |
| SRR9715740 | Leaf | 0.367 |
| SRR9715741 | Leaf | 0.148 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.819 |
| SRR9715743 | Root | 0.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.338 |
| SRR8749028 | MeJA induced 9h | 61.723 |
| SRR8749029 | MeJA induced 9h | 88.729 |
| SRR8749030 | Uninduced | 13.655 |
| SRR8749031 | Uninduced | 49.453 |
| SRR8749032 | Uninduced | 21.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.750 |
| SRR8400027 | Control - Root | 0.598 |