Gene detail information of Glyur000637s00026806 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24610.1 | 9.00E-41 | |
| NR | AGV54833.1 | 1.86E-68 | hypothetical protein [Phaseolus vulgaris] |
| trEMBL | tr|T2DQ29|T2DQ29_PHAVU | 7.00E-69 | Uncharacterized protein {ECO:0000313|EMBL:AGV54833.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00637 | 39184 | 41312 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.864 |
| SRR1783600 | control | 35.122 |
| SRR1783602 | moderate drought stress | 28.430 |
| SRR1811619 | moderate drought stress | 27.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.515 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.077 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.363 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.256 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.633 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 59.919 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 58.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.829 |
| SRR2868004 | Drought Stress (root) | 74.087 |
| SRR2967015 | Control (root) | 89.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 69.399 |
| SRR9715740 | Leaf | 58.912 |
| SRR9715741 | Leaf | 81.748 |
| SRR9715739 | Root | 17.312 |
| SRR9715742 | Root | 21.973 |
| SRR9715743 | Root | 23.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.018 |
| SRR8749028 | MeJA induced 9h | 10.972 |
| SRR8749029 | MeJA induced 9h | 13.488 |
| SRR8749030 | Uninduced | 8.766 |
| SRR8749031 | Uninduced | 5.901 |
| SRR8749032 | Uninduced | 8.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 71.755 |
| SRR8400027 | Control - Root | 60.551 |