Gene detail information of Glyur000633s00034363 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN28126.1 | 1.04E-50 | hypothetical protein glysoja_046703 [Glycine soja] |
| trEMBL | tr|I1MW53|I1MW53_SOYBN | 1.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G23790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00633 | 77503 | 78098 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000633s00034363.1 | PF05919.6 | Mitovir_RNA_pol | 78 | 126 | 2.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.061 |
| SRR1783600 | control | 2.212 |
| SRR1783602 | moderate drought stress | 3.974 |
| SRR1811619 | moderate drought stress | 3.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.081 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.369 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.780 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.229 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.285 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.604 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.357 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.325 |
| SRR2868004 | Drought Stress (root) | 2.294 |
| SRR2967015 | Control (root) | 3.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.023 |
| SRR9715740 | Leaf | 1.261 |
| SRR9715741 | Leaf | 0.884 |
| SRR9715739 | Root | 8.023 |
| SRR9715742 | Root | 3.015 |
| SRR9715743 | Root | 3.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.288 |
| SRR8749028 | MeJA induced 9h | 0.750 |
| SRR8749029 | MeJA induced 9h | 1.793 |
| SRR8749030 | Uninduced | 2.252 |
| SRR8749031 | Uninduced | 1.069 |
| SRR8749032 | Uninduced | 4.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.358 |
| SRR8400027 | Control - Root | 0.410 |