Gene detail information of Glyur000632s00032394 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26470.1 | 8.00E-107 | |
| NR | XP_003622783.1 | 0 | hypothetical protein MTR_7g052250 [Medicago truncatula] |
| COG | YP_592965.1 | 1.00E-44 | hypothetical protein Acid345_3891 [Candidatus Koribacter versatilis Ellin345] |
| trEMBL | tr|G7KY24|G7KY24_MEDTR | 0 | UPF0361 C3orf37-like protein {ECO:0000313|EMBL:AES79001.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00632 | 21149 | 25713 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000632s00032394.1 | PF02586.9 | DUF159 | 24 | 247 | 4.20E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.326 |
| SRR1783600 | control | 3.277 |
| SRR1783602 | moderate drought stress | 7.917 |
| SRR1811619 | moderate drought stress | 8.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.622 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.452 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.021 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.162 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.492 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.494 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.657 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.278 |
| SRR2868004 | Drought Stress (root) | 6.076 |
| SRR2967015 | Control (root) | 8.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.581 |
| SRR9715740 | Leaf | 3.900 |
| SRR9715741 | Leaf | 3.419 |
| SRR9715739 | Root | 2.117 |
| SRR9715742 | Root | 2.193 |
| SRR9715743 | Root | 1.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.334 |
| SRR8749028 | MeJA induced 9h | 4.334 |
| SRR8749029 | MeJA induced 9h | 7.294 |
| SRR8749030 | Uninduced | 1.915 |
| SRR8749031 | Uninduced | 1.728 |
| SRR8749032 | Uninduced | 2.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.547 |
| SRR8400027 | Control - Root | 7.751 |