Gene detail information of Glyur000630s00024930 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45520.1 | 9.00E-18 | |
| NR | XP_003534600.1 | 4.10E-89 | PREDICTED: glutamic acid-rich protein-like [Glycine max] |
| trEMBL | tr|I1L6S7|I1L6S7_SOYBN | 2.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G40370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00630 | 13575 | 15828 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.947 |
| SRR1783600 | control | 18.137 |
| SRR1783602 | moderate drought stress | 14.632 |
| SRR1811619 | moderate drought stress | 14.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.183 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.714 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.933 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.047 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.627 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.541 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.474 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.328 |
| SRR2868004 | Drought Stress (root) | 22.852 |
| SRR2967015 | Control (root) | 17.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.784 |
| SRR9715740 | Leaf | 22.759 |
| SRR9715741 | Leaf | 11.260 |
| SRR9715739 | Root | 0.748 |
| SRR9715742 | Root | 8.639 |
| SRR9715743 | Root | 6.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 76.007 |
| SRR8749028 | MeJA induced 9h | 29.946 |
| SRR8749029 | MeJA induced 9h | 45.505 |
| SRR8749030 | Uninduced | 3.433 |
| SRR8749031 | Uninduced | 1.000 |
| SRR8749032 | Uninduced | 1.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.132 |
| SRR8400027 | Control - Root | 24.853 |