Gene detail information of Glyur000629s00020936 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G04990.1 | 3.00E-107 | SAD1/UNC-84 domain protein 1 |
| NR | XP_004511152.1 | 0 | PREDICTED: SUN domain-containing protein 1-like [Cicer arietinum] |
| trEMBL | tr|I1MII0|I1MII0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G35240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00629 | 95025 | 99827 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000629s00020936.1 | PF07738.8 | Sad1_UNC | 329 | 459 | 1.70E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.617 |
| SRR1783600 | control | 15.737 |
| SRR1783602 | moderate drought stress | 12.424 |
| SRR1811619 | moderate drought stress | 12.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.951 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.630 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.662 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.361 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.643 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.620 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.761 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 44.542 |
| SRR2868004 | Drought Stress (root) | 37.380 |
| SRR2967015 | Control (root) | 37.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.125 |
| SRR9715740 | Leaf | 24.787 |
| SRR9715741 | Leaf | 25.998 |
| SRR9715739 | Root | 25.798 |
| SRR9715742 | Root | 40.421 |
| SRR9715743 | Root | 34.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.416 |
| SRR8749028 | MeJA induced 9h | 10.471 |
| SRR8749029 | MeJA induced 9h | 8.097 |
| SRR8749030 | Uninduced | 9.100 |
| SRR8749031 | Uninduced | 8.078 |
| SRR8749032 | Uninduced | 9.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.014 |
| SRR8400027 | Control - Root | 40.798 |