Gene detail

Gene detail information of Glyur000629s00020932.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G56850.1	2.00E-58	ABA-responsive element binding protein 3
NR	XP_003531785.1	0	PREDICTED: transcription factor bZIP70 isoform X1 [Glycine max]
Swissprot	tr\|Q9LES3\|AI5L2_ARATH	2.00E-95	ABSCISIC ACID-INSENSITIVE 5-like protein 2
trEMBL	tr\|I1KVX1\|I1KVX1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G24340.1}

Sequence

Transcript Sequence

>Glyur000629s00020932.1
TTTTCACTCTCTAACATCTCTCTCTCTAACCCACCTCGGATTGTGTCTCTCTCTCTCTCACACAGACACACTTGTCTTGTGGAAGCTTTCTTCATCAGCCTGCTTTGTCAAACGCTTCTGCTGAATTTTGTATCCAAAACTCATTGCTTCAGTCACTCACTCTATACACTTTCAGATCGGTGTCTCTCTCCGACAAACAAACAAAGCTTCTAATTTTCTGGAGCAGGATTGAAAATTTGGATCAGGTGTTTTCATTCTTGTAGTACTAAAATAGTTGAAGTGAATTGTTATCGGTGGTAATTAGTAAATGGGGACCCAAGCTATAGGGTNTCAAGGTGGTGGAGACAACAGTAGTGGAAAGCGGTCACAACTTGAGCCTTTGGTGCGGCAAAACTCGGTGTACAGTCTCACACTTGACGAGGTTCAGAATCAATTAGGTGATTTAGGGAAGCCCCTAAGTAGTATGAACCTTGATGAGCTTCTAAAAAATTTATGGACCGTCGAGGCAAGCCAGTCCATAGGTATGGACAATGAGGGCACGGTACAAGCTAGTCAAGCTTCTCTGCAGCGTCAGGCTAGTCTGTCATTAACGGGTGCACTAAGCAAGAAGACCGTGGATGAGGTTTGGAGAGATATCCAACGAAACAAAGACAGCGAGGAGAAGAAGTCGCGAGACAGACAACCTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTTGTCGCAGAAGGATCTTCTGATAAAAAGAATACCGGCACTACAGCTGGATTTGATTCGAATGTGGCAGTAGTACCGCAGTTTCCTCCGCAAGGTCAGTGGATACAGTATCCACAACNGCAATATCAGCATCCGCAACAAAGTTTGATGGGGATGTACATGCCTAGCCAGGGTCTAGCACAGCCATTACACATGGGGGCTGGTGCTTCATTGGATGTTCCGTTTGCAGATAGTCAGGTGGCATTGCCTTCATCTCTGATGGGAACAGTGTCAGATACGCAGACGCCTGGAAGAAAAAGGAGCACTCCAGAAGACATGATCGAGAAGACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACAAATGAGTTGGAGAATAAAGTTTCACGTCTGGAAGAGGAAAACGAAAGGCTGAGGAAACGACAGGAGCTAGAGAAGATGTTGCCATGTGCACCACCTCCTGAGCCTAAATATCAACTACGCCGAATAGCATCAGCTCCATTCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00629	77326	81316	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000629s00020932.1	PF00170.16	bZIP_1	254	303	1.60E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.979
SRR1783600	control	4.781
SRR1783602	moderate drought stress	7.290
SRR1811619	moderate drought stress	7.167

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.093
DRR006520	Root Summer glycyrrhizin high producing strain	9.940
DRR006521	Root Winter glycyrrhizin high producing strain	11.867
DRR006522	Root Winter glycyrrhizin high producing strain	11.451
DRR006523	Root Summer glycyrrhizin low producing strain	12.439
DRR006524	Root Summer glycyrrhizin low producing strain	12.645
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.779
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.885

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.340
SRR2868004	Drought Stress (root)	10.014
SRR2967015	Control (root)	11.360

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.707
SRR9715740	Leaf	7.227
SRR9715741	Leaf	7.372
SRR9715739	Root	6.128
SRR9715742	Root	8.907
SRR9715743	Root	7.206

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.846
SRR8749028	MeJA induced 9h	8.392
SRR8749029	MeJA induced 9h	7.278
SRR8749030	Uninduced	3.186
SRR8749031	Uninduced	1.252
SRR8749032	Uninduced	1.537

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.404
SRR8400027	Control - Root	10.675