Gene detail

Gene detail information of Glyur000628s00026632.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G52890.2	6.00E-93	KCBP-interacting protein kinase
NR	XP_004497610.1	0	PREDICTED: serine/threonine-protein kinase KIPK-like isoform X1 [Cicer arietinum]
COG	YP_828824.1	6.00E-13	serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprot	tr\|Q9LFA2\|KIPK_ARATH	2.00E-116	Serine/threonine-protein kinase KIPK
trEMBL	tr\|K7LZW5\|K7LZW5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G21660.2}

Sequence

Transcript Sequence

>Glyur000628s00026632.1
ATGGGCTCATTCTCTGGCACTTGTGAAATTGTTGAAGCAAGGGAAGACCAAAATACAGGGAAAGGACACAAGGATAATATAGATGATGATATTAATAAGCTGTTTGAATCAATTACTCTCAAATCTTCATCAAGGGATTTGGGCTTTCTACAAGATGGAACAAGTCCTAAGATGAAAAGTGCAATGAAAAAGCCAATCACACAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCTATGAAAAGATTATCAAAGTCAGCAGCTTCTCCAAGAATATCGGAGGTTGGGAAGATACAGACACTGTACAATTCAGTTGTAGCTGAAGGTAGGAGATCTGGGCCTTCTAATGTTGAGGGTAAAGGGAGTACAATTGAAATATCTCTAGTGCCTGAAGAAAGCAAGTCACTTGCTTTGAATAAAGAATCCCATGATTTGGCATGTTCATCAAGTAAAGTTGGGGTTTCATCACAACCATCGGATCCTGCTCAAATAGAAGAGAAAACATCTGCATCTTCTCCATCTAGTTTATCTTCCTCATCTACTTCAGTAAATGGCAATAGAGGGTGCAAGCTGTCACGCAATGGCCCCCGTACAGTCAAATCGGTAATCAAGAACAAGAATTTGGGTAAGAAGAAACTAAAGCAGGATTCTGTTTCTGCTTTATGTGATCCTTCATCCAATGAAGTAAGTAACAAGTCAGTTCCTGATGGAATAAACTTGAGTAGTGTGCTCTCTGGCTCAGCATCAACTGGCTGTAATAGCGGCAGAGAAGTTACGAAAGCAAAAAAGAACACCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACCACAGTAGTAGTACAAGTACCAGCAGTGATAGCAATGTCAGTGGTTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGATGGGAAGCCATACGACATGCTCAAATGCAGCATGGAGTCTTGGGTTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTATAATCTGTCCTGTCTGATCATGGAGTATTGTCCAGGAGGAGATCTTCATGTTCTACGGCAGAAACAGCTTGGTAGAAGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCCTTGGAGTACTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGAGAAGATGGCCACATTATGCTCACAGATTTTGACCTGTCACTCAGGTGTGATGTTAGCCCAACGCTTCTAAAGTCATCTTCTGATGTGGATCCTGCTAAGATTTCCGCCATTCTGCATCGAACCATCTTGTCAAGTTCCATGCTTCAGCCCAAGATTCTTACCTCCTTCAGCAAAAGCAAGGAAACTAAAATCCGATCTTGCCGCTCAGATCAGATCATTGCCACAGCTCCTGCAGTTGACTGGTGGACATTTGGTGTTTTCCTTTATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCCAACGTTGTGTTGCAAGCTCTCAGATTCCCTGACAGCCCATTTGTTAGTTTCCAAGCTAGGGATCTCATCAGAGGGTTGTTGGTTAAAGAACCTGAAAACCGTTTGGGTTCTGAGAAAGGAGCTGCAGAGATCAAACAGCATCCCTTCTTTGAGGACTTTTGTGAGTTTGGAGTTTCAGACATGACTGCACAGTCACAAGGCAAGAGTGAGGGGCATTCTTGTCGATTCCCTTGTTTCTGGCTCTATATGCTTTACGTGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00628	10515	14821	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000628s00026632.1	PF00069.20	Pkinase	315	565	1.40E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.631
SRR1783600	control	11.741
SRR1783602	moderate drought stress	15.367
SRR1811619	moderate drought stress	15.809

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.628
DRR006520	Root Summer glycyrrhizin high producing strain	15.073
DRR006521	Root Winter glycyrrhizin high producing strain	2.386
DRR006522	Root Winter glycyrrhizin high producing strain	2.418
DRR006523	Root Summer glycyrrhizin low producing strain	9.688
DRR006524	Root Summer glycyrrhizin low producing strain	9.106
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.719
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.377

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.443
SRR2868004	Drought Stress (root)	6.504
SRR2967015	Control (root)	9.012

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.462
SRR9715740	Leaf	6.982
SRR9715741	Leaf	5.922
SRR9715739	Root	3.349
SRR9715742	Root	12.532
SRR9715743	Root	10.589

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.731
SRR8749028	MeJA induced 9h	8.653
SRR8749029	MeJA induced 9h	8.425
SRR8749030	Uninduced	4.059
SRR8749031	Uninduced	3.038
SRR8749032	Uninduced	4.529

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.979
SRR8400027	Control - Root	13.925