Gene detail information of Glyur000627s00029179 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G28230.1 | 1.00E-102 | purine permease 1 |
| NR | XP_003615204.1 | 0 | Purine permease [Medicago truncatula] |
| Swissprot | tr|Q9FZ96|PUP1_ARATH | 3.00E-133 | Purine permease 1 |
| trEMBL | tr|G7KBC7|G7KBC7_MEDTR | 0 | Purine permease {ECO:0000313|EMBL:AES98162.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00627 | 105517 | 107994 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000627s00029179.1 | PF00892.15 | EamA | 103 | 178 | 1.10E-07 |
| Glyur000627s00029179.1 | PF03151.11 | TPT | 199 | 348 | 1.00E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.076 |
| SRR1783600 | control | 0.095 |
| SRR1783602 | moderate drought stress | 0.595 |
| SRR1811619 | moderate drought stress | 0.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.112 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.112 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.782 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.522 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.217 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.231 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.760 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.697 |
| SRR2868004 | Drought Stress (root) | 2.837 |
| SRR2967015 | Control (root) | 3.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.714 |
| SRR9715740 | Leaf | 15.079 |
| SRR9715741 | Leaf | 26.276 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.610 |
| SRR9715743 | Root | 0.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.503 |
| SRR8749028 | MeJA induced 9h | 1.890 |
| SRR8749029 | MeJA induced 9h | 6.104 |
| SRR8749030 | Uninduced | 0.755 |
| SRR8749031 | Uninduced | 2.471 |
| SRR8749032 | Uninduced | 4.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.926 |
| SRR8400027 | Control - Root | 0.886 |