Gene detail information of Glyur000627s00029177


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28210.12.00E-133DNAJ heat shock family protein
NRXP_004490396.10PREDICTED: chaperone protein dnaJ 1, mitochondrial-like isoform X1 [Cicer arietinum]
COGYP_003238606.18.00E-77chaperone protein DnaJ [Ammonifex degensii KC4]
Swissprottr|Q38813|DNAJ1_ARATH3.00E-171Chaperone protein dnaJ 1, mitochondrial (Precursor)
trEMBLtr|A0A072UQH8|A0A072UQH8_MEDTR0DnaJ-class molecular chaperone {ECO:0000313|EMBL:KEH28110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0062790191105297+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006457  protein folding

GO:0009408  response to heat


molecular_function

GO:0005524  ATP binding

GO:0031072  heat shock protein binding

GO:0051082  unfolded protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000627s00029177.1PF00226.26DnaJ831451.40E-25
Glyur000627s00029177.1PF00684.14DnaJ_CXXCXGXG2493052.60E-08
Glyur000627s00029177.1PF01556.13CTDII3634413.70E-23
Glyur000627s00029177.2PF00226.26DnaJ831451.40E-25
Glyur000627s00029177.2PF00684.14DnaJ_CXXCXGXG2493053.30E-08
Glyur000627s00029177.2PF01556.13CTDII3634413.60E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.699
SRR1783600control5.733
SRR1783602moderate drought stress8.845
SRR1811619moderate drought stress8.924

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.277
DRR006520Root Summer glycyrrhizin high producing strain9.211
DRR006521Root Winter glycyrrhizin high producing strain11.704
DRR006522Root Winter glycyrrhizin high producing strain11.703
DRR006523Root Summer glycyrrhizin low producing strain10.570
DRR006524Root Summer glycyrrhizin low producing strain10.473
DRR006525Leaf Summer glycyrrhizin high producing strain12.431
DRR006526Leaf Summer glycyrrhizin high producing strain12.339

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)9.655
SRR2868004Drought Stress (root)12.386
SRR2967015Control (root)11.516

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf8.677
SRR9715740Leaf15.406
SRR9715741Leaf9.170
SRR9715739Root0.590
SRR9715742Root3.432
SRR9715743Root3.018

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.917
SRR8749028MeJA induced 9h30.238
SRR8749029MeJA induced 9h49.624
SRR8749030Uninduced24.446
SRR8749031Uninduced38.735
SRR8749032Uninduced33.022

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root12.298
SRR8400027Control - Root12.146

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved