Gene detail information of Glyur000627s00029174 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14600.1 | 6.00E-40 | Target SNARE coiled-coil domain protein |
| NR | KHN35467.1 | 1.10E-66 | Bet1-like protein [Glycine soja] |
| Swissprot | tr|Q8VXX9|BETL1_ARATH | 5.00E-50 | Bet1-like protein At4g14600 |
| trEMBL | tr|C6T099|C6T099_SOYBN | 7.00E-67 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G35710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00627 | 29540 | 32561 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.100 |
| SRR1783600 | control | 36.736 |
| SRR1783602 | moderate drought stress | 33.446 |
| SRR1811619 | moderate drought stress | 33.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 42.100 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.987 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.505 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.239 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 76.937 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.866 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.931 |
| SRR2868004 | Drought Stress (root) | 37.988 |
| SRR2967015 | Control (root) | 32.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.574 |
| SRR9715740 | Leaf | 37.795 |
| SRR9715741 | Leaf | 63.235 |
| SRR9715739 | Root | 11.665 |
| SRR9715742 | Root | 28.900 |
| SRR9715743 | Root | 27.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 48.574 |
| SRR8749028 | MeJA induced 9h | 30.839 |
| SRR8749029 | MeJA induced 9h | 54.976 |
| SRR8749030 | Uninduced | 93.142 |
| SRR8749031 | Uninduced | 107.130 |
| SRR8749032 | Uninduced | 124.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.635 |
| SRR8400027 | Control - Root | 41.118 |