Gene detail information of Glyur000627s00029173 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24380.1 | 2.00E-11 | |
| NR | XP_004490394.1 | 4.94E-14 | PREDICTED: rhodanese-like domain-containing protein 6-like [Cicer arietinum] |
| trEMBL | tr|E0CRS4|E0CRS4_VITVI | 3.00E-14 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI19228.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00627 | 9767 | 10475 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000627s00029173.1 | PF03959.8 | FSH1 | 2 | 45 | 2.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.395 |
| SRR1783600 | control | 7.225 |
| SRR1783602 | moderate drought stress | 4.061 |
| SRR1811619 | moderate drought stress | 5.976 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.388 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.104 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.457 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.844 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.246 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.579 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.049 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.020 |
| SRR2868004 | Drought Stress (root) | 13.359 |
| SRR2967015 | Control (root) | 5.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.058 |
| SRR9715740 | Leaf | 7.926 |
| SRR9715741 | Leaf | 15.348 |
| SRR9715739 | Root | 3.683 |
| SRR9715742 | Root | 9.756 |
| SRR9715743 | Root | 9.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.626 |
| SRR8749028 | MeJA induced 9h | 7.465 |
| SRR8749029 | MeJA induced 9h | 14.950 |
| SRR8749030 | Uninduced | 50.591 |
| SRR8749031 | Uninduced | 60.178 |
| SRR8749032 | Uninduced | 36.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.321 |
| SRR8400027 | Control - Root | 16.693 |