Gene detail information of Glyur000626s00022220 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07010.1 | 1.00E-154 | Calcineurin-like metallo-phosphoesterase superfamily protein |
| NR | XP_003615834.1 | 0 | Pectinesterase [Medicago truncatula] |
| COG | YP_008147855.1 | 1.00E-57 | hypothetical protein SCE1572_07000 [Sorangium cellulosum So0157-2] |
| Swissprot | tr|Q944L7|Y1480_ARATH | 8.00E-61 | Uncharacterized protein At1g18480 |
| trEMBL | tr|G7KEE1|G7KEE1_MEDTR | 0 | Calcineurin-like metallo-phosphoesterase superfamily protein {ECO:0000313|EMBL:AES98792.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00626 | 99739 | 107900 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000626s00022220.1 | PF00149.23 | Metallophos | 68 | 212 | 8.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.755 |
| SRR1783600 | control | 0.713 |
| SRR1783602 | moderate drought stress | 2.579 |
| SRR1811619 | moderate drought stress | 2.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.069 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.158 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.967 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.352 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.543 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.219 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.428 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.165 |
| SRR2868004 | Drought Stress (root) | 6.774 |
| SRR2967015 | Control (root) | 4.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.070 |
| SRR9715740 | Leaf | 73.031 |
| SRR9715741 | Leaf | 61.706 |
| SRR9715739 | Root | 0.270 |
| SRR9715742 | Root | 1.926 |
| SRR9715743 | Root | 1.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.110 |
| SRR8749028 | MeJA induced 9h | 10.405 |
| SRR8749029 | MeJA induced 9h | 9.508 |
| SRR8749030 | Uninduced | 4.181 |
| SRR8749031 | Uninduced | 1.496 |
| SRR8749032 | Uninduced | 1.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.984 |
| SRR8400027 | Control - Root | 3.139 |