Gene detail information of Glyur000625s00022693 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06035.1 | 1.00E-58 | Glycoprotein membrane precursor GPI-anchored |
| NR | XP_004496769.1 | 1.44E-119 | PREDICTED: uncharacterized GPI-anchored protein At3g06035-like [Cicer arietinum] |
| Swissprot | tr|Q84MC0|UGPI4_ARATH | 5.00E-73 | Uncharacterized GPI-anchored protein At3g06035 (Precursor) |
| trEMBL | tr|A0A072VQ56|A0A072VQ56_MEDTR | 6.00E-119 | Glycoprotein membrane GPI-anchored protein {ECO:0000313|EMBL:KEH43907.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00625 | 99320 | 102894 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.816 |
| SRR1783600 | control | 8.959 |
| SRR1783602 | moderate drought stress | 6.817 |
| SRR1811619 | moderate drought stress | 6.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.249 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.413 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.623 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.078 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.655 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.091 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.537 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.034 |
| SRR2868004 | Drought Stress (root) | 9.570 |
| SRR2967015 | Control (root) | 8.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.389 |
| SRR9715740 | Leaf | 5.289 |
| SRR9715741 | Leaf | 5.994 |
| SRR9715739 | Root | 1.041 |
| SRR9715742 | Root | 4.381 |
| SRR9715743 | Root | 4.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.367 |
| SRR8749028 | MeJA induced 9h | 1.749 |
| SRR8749029 | MeJA induced 9h | 1.835 |
| SRR8749030 | Uninduced | 3.024 |
| SRR8749031 | Uninduced | 1.692 |
| SRR8749032 | Uninduced | 0.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.145 |
| SRR8400027 | Control - Root | 16.232 |