Gene detail information of Glyur000621s00034376 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004497665.1 | 5.84E-24 | PREDICTED: putative syntaxin-24-like [Cicer arietinum] |
| trEMBL | tr|A0A072VIT5|A0A072VIT5_MEDTR | 4.00E-19 | Harpin-induced-like protein {ECO:0000313|EMBL:KEH41914.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00621 | 125776 | 127642 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.378 |
| SRR1783600 | control | 0.489 |
| SRR1783602 | moderate drought stress | 0.376 |
| SRR1811619 | moderate drought stress | 1.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.345 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.981 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.167 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.164 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.475 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.479 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.275 |
| SRR2868004 | Drought Stress (root) | 0.218 |
| SRR2967015 | Control (root) | 0.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.915 |
| SRR9715740 | Leaf | 12.235 |
| SRR9715741 | Leaf | 5.232 |
| SRR9715739 | Root | 12.026 |
| SRR9715742 | Root | 5.308 |
| SRR9715743 | Root | 4.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.479 |
| SRR8749028 | MeJA induced 9h | 0.274 |
| SRR8749029 | MeJA induced 9h | 0.330 |
| SRR8749030 | Uninduced | 4.097 |
| SRR8749031 | Uninduced | 0.821 |
| SRR8749032 | Uninduced | 0.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.869 |
| SRR8400027 | Control - Root | 2.334 |