Gene detail information of Glyur000620s00017800 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G32930.1 | 3.00E-81 | |
| NR | XP_004502180.1 | 2.66E-135 | PREDICTED: uncharacterized protein LOC101497962 [Cicer arietinum] |
| trEMBL | tr|I3SNB5|I3SNB5_LOTJA | 1.00E-125 | Uncharacterized protein {ECO:0000313|EMBL:AFK41757.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00620 | 103730 | 107268 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.240 |
| SRR1783600 | control | 40.260 |
| SRR1783602 | moderate drought stress | 57.683 |
| SRR1811619 | moderate drought stress | 57.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.734 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 45.639 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.740 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.384 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 50.050 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 67.874 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 67.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.422 |
| SRR2868004 | Drought Stress (root) | 23.929 |
| SRR2967015 | Control (root) | 41.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.770 |
| SRR9715740 | Leaf | 56.816 |
| SRR9715741 | Leaf | 56.302 |
| SRR9715739 | Root | 29.452 |
| SRR9715742 | Root | 25.366 |
| SRR9715743 | Root | 19.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.355 |
| SRR8749028 | MeJA induced 9h | 14.976 |
| SRR8749029 | MeJA induced 9h | 12.715 |
| SRR8749030 | Uninduced | 3.970 |
| SRR8749031 | Uninduced | 1.057 |
| SRR8749032 | Uninduced | 3.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.226 |
| SRR8400027 | Control - Root | 34.282 |