Gene detail

Gene detail information of Glyur000620s00017795.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G04845.1	1.00E-73	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	XP_003601577.1	2.86E-121	N-acetyltransferase 9-like protein [Medicago truncatula]
COG	YP_645369.1	1.00E-09	N-acetyltransferase GCN5 [Rubrobacter xylanophilus DSM 9941]
trEMBL	tr\|G7J9I9\|G7J9I9_MEDTR	1.00E-121	Uncharacterized protein {ECO:0000313\|EMBL:AFK36870.1}

Sequence

Transcript Sequence

>Glyur000620s00017795.1
AAAAAATAAGAGATTCCTCTTAAGAGAGACGATAATGCAAAAGTTACCGAAATAAATAACAATCAGCAGCAGNACTTTTCCGTTCAGAGTGATTGAAAATCCGATTACACAAAAGGCTACAGTTTGAGTTTGATTTTGACCGNGAGGGTCGGCGATTCGATTGCTGGAGAGTGAGAGCGAGAGCGAGATGGAGGGGACAACAACAATAACAAGAAGCAAAGGGAGTGTTTGTGTGAGTTTAGAAGGAGAGAAAGTAATATTGGTCCCTTACATGGAAGCCCACGTGCCCAAGTACCACGAGTGGATGCAAGACCCTTCCCTCCTTCAAGCCACTGCCTCCGAACCCCTTTCCCTTGAGCAGGAGTACCAGATGCAACTCTCCTGGTCACGTGATCCCAACAAGGAGACGTTTATTGTGTTGGANAAGGACTTGGTTGTTGGAAATTTCTCACATGGGGAACCCCATGTTGAAGCCATGGTCGGTGATGTAAATATATTCATGAATGACACGGATAATCCTCAAATGGCAGAGATTGAAATAATGATAGCTGAACAAAAGAGCCGTGGAAAAGGACTTGCAAAGGAGTCTGTTCTGATGATGATGGCCTTTGCTGTTGAGAAGTTAGGGATCAAAATCTTTCAGGTTAAAATTGGAGAATCAAATGTTGCATCCCTTGACCTGTTCAAAAAACTGGGGTTTGTGCAAACTTCACATAGCAACATTTTCAAAGAGGTGACTTTGGAGTTGCAAATAACACAACCCAAGAACGAGGAGATGCTTGGTTTGATGGGTATTGTGATAAAACACACATAAACTTATGCAACATCATGGTATCTATTGGTGATACAATAATATCTTTTGTGGGTGTTNCTTGTTCATGATGTGCGGCTTCAAGCTGTCTTACCAATACAAGATTCTGACATTATTCATCNAACTATTCTTGCCTTTCAAGTGTAAGAATTTGCTTTGACCAAAAAAAAGGTGTANGAATTTGAAATTAAAAGTAATAGATTGATATTTGTAATATTCCTTTCCCCATGTCCCATTTTACCCTTTCTATCTTTATCAATAACATGATATAAAGGGGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00620	70996	74674	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000620s00017795.1	PF13302.1	Acetyltransf_3	23	172	4.00E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.474
SRR1783600	control	3.331
SRR1783602	moderate drought stress	3.230
SRR1811619	moderate drought stress	3.155

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.228
DRR006520	Root Summer glycyrrhizin high producing strain	7.174
DRR006521	Root Winter glycyrrhizin high producing strain	4.741
DRR006522	Root Winter glycyrrhizin high producing strain	4.566
DRR006523	Root Summer glycyrrhizin low producing strain	6.468
DRR006524	Root Summer glycyrrhizin low producing strain	6.500
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.928
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.748

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.746
SRR2868004	Drought Stress (root)	10.786
SRR2967015	Control (root)	12.081

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.554
SRR9715740	Leaf	5.820
SRR9715741	Leaf	7.842
SRR9715739	Root	2.006
SRR9715742	Root	4.615
SRR9715743	Root	3.157

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.860
SRR8749028	MeJA induced 9h	4.782
SRR8749029	MeJA induced 9h	2.567
SRR8749030	Uninduced	4.838
SRR8749031	Uninduced	1.614
SRR8749032	Uninduced	2.011

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.074
SRR8400027	Control - Root	12.674