Gene detail information of Glyur000620s00017788 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04960.1 | 3.00E-55 | Protein of unknown function (DUF1664) |
| NR | XP_004502160.1 | 1.66E-104 | PREDICTED: uncharacterized protein LOC101491884 [Cicer arietinum] |
| trEMBL | tr|T2DP89|T2DP89_PHAVU | 7.00E-104 | Uncharacterized protein {ECO:0000313|EMBL:AGV54759.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00620 | 39806 | 41951 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000620s00017788.1 | PF07889.7 | DUF1664 | 1 | 109 | 2.80E-45 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.903 |
| SRR1783600 | control | 21.366 |
| SRR1783602 | moderate drought stress | 29.863 |
| SRR1811619 | moderate drought stress | 28.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.767 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.382 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 42.914 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 41.920 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.441 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.410 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.894 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.134 |
| SRR2868004 | Drought Stress (root) | 46.756 |
| SRR2967015 | Control (root) | 40.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.232 |
| SRR9715740 | Leaf | 18.919 |
| SRR9715741 | Leaf | 33.440 |
| SRR9715739 | Root | 4.450 |
| SRR9715742 | Root | 10.236 |
| SRR9715743 | Root | 8.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.351 |
| SRR8749028 | MeJA induced 9h | 57.412 |
| SRR8749029 | MeJA induced 9h | 56.229 |
| SRR8749030 | Uninduced | 105.889 |
| SRR8749031 | Uninduced | 97.065 |
| SRR8749032 | Uninduced | 67.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.924 |
| SRR8400027 | Control - Root | 35.468 |