Gene detail information of Glyur000620s00017786 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04960.1 | 7.00E-25 | Protein of unknown function (DUF1664) |
| NR | XP_004502160.1 | 4.40E-37 | PREDICTED: uncharacterized protein LOC101491884 [Cicer arietinum] |
| trEMBL | tr|T2DP89|T2DP89_PHAVU | 9.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:AGV54759.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00620 | 37395 | 39040 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.287 |
| SRR1783600 | control | 3.564 |
| SRR1783602 | moderate drought stress | 4.147 |
| SRR1811619 | moderate drought stress | 4.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.262 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.136 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.507 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.515 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.760 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.926 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.867 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.338 |
| SRR2868004 | Drought Stress (root) | 24.821 |
| SRR2967015 | Control (root) | 25.870 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.136 |
| SRR9715740 | Leaf | 9.289 |
| SRR9715741 | Leaf | 11.498 |
| SRR9715739 | Root | 1.954 |
| SRR9715742 | Root | 4.106 |
| SRR9715743 | Root | 4.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.514 |
| SRR8749028 | MeJA induced 9h | 23.614 |
| SRR8749029 | MeJA induced 9h | 11.655 |
| SRR8749030 | Uninduced | 13.176 |
| SRR8749031 | Uninduced | 12.541 |
| SRR8749032 | Uninduced | 8.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.538 |
| SRR8400027 | Control - Root | 22.140 |