Gene detail information of Glyur000617s00023885 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12580.1 | 0 | heat shock protein 70 |
| NR | XP_006574819.1 | 0 | PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c-like isoform X1 [Glycine max] |
| COG | YP_004113662.1 | 9.00E-146 | chaperone protein DnaK [Desulfurispirillum indicum S5] |
| Swissprot | tr|P09189|HSP7C_PETHY | 0 | Heat shock cognate 70 kDa protein |
| trEMBL | tr|K7K754|K7K754_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G09400.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00617 | 132772 | 137028 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000617s00023885.1 | PF00012.15 | HSP70 | 9 | 73 | 1.60E-25 |
| Glyur000617s00023885.1 | PF00012.15 | HSP70 | 91 | 487 | 3.60E-165 |
| Glyur000617s00023885.1 | PF00012.15 | HSP70 | 510 | 624 | 5.60E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.276 |
| SRR1783600 | control | 7.011 |
| SRR1783602 | moderate drought stress | 3.854 |
| SRR1811619 | moderate drought stress | 3.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.677 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.993 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.292 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.281 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.554 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.776 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.627 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.785 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.332 |
| SRR2868004 | Drought Stress (root) | 4.651 |
| SRR2967015 | Control (root) | 6.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.341 |
| SRR9715740 | Leaf | 0.507 |
| SRR9715741 | Leaf | 4.242 |
| SRR9715739 | Root | 2.167 |
| SRR9715742 | Root | 33.699 |
| SRR9715743 | Root | 29.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.910 |
| SRR8749028 | MeJA induced 9h | 0.312 |
| SRR8749029 | MeJA induced 9h | 0.105 |
| SRR8749030 | Uninduced | 0.021 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.140 |
| SRR8400027 | Control - Root | 10.863 |