Gene detail information of Glyur000617s00023881 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38060.1 | 4.00E-39 | |
| NR | AFK44814.1 | 6.04E-71 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SX22|I3SX22_LOTJA | 2.00E-71 | Uncharacterized protein {ECO:0000313|EMBL:AFK44814.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00617 | 114970 | 118605 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.992 |
| SRR1783600 | control | 8.864 |
| SRR1783602 | moderate drought stress | 9.244 |
| SRR1811619 | moderate drought stress | 9.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.880 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.063 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.395 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.709 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.681 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.071 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.131 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.409 |
| SRR2868004 | Drought Stress (root) | 2.662 |
| SRR2967015 | Control (root) | 3.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.150 |
| SRR9715740 | Leaf | 12.284 |
| SRR9715741 | Leaf | 10.266 |
| SRR9715739 | Root | 2.023 |
| SRR9715742 | Root | 5.165 |
| SRR9715743 | Root | 3.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.837 |
| SRR8749028 | MeJA induced 9h | 6.534 |
| SRR8749029 | MeJA induced 9h | 4.204 |
| SRR8749030 | Uninduced | 4.752 |
| SRR8749031 | Uninduced | 4.605 |
| SRR8749032 | Uninduced | 4.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.403 |
| SRR8400027 | Control - Root | 17.893 |