Gene detail information of Glyur000617s00023880 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_009803715.1 | 8.16E-08 | PREDICTED: uncharacterized protein LOC104249044 [Nicotiana sylvestris] |
| trEMBL | tr|A0A061EHA1|A0A061EHA1_THECC | 9.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:EOY04038.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00617 | 109243 | 110853 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.165 |
| SRR1783600 | control | 0.306 |
| SRR1783602 | moderate drought stress | 1.539 |
| SRR1811619 | moderate drought stress | 1.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.352 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.417 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.638 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.478 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.462 |
| SRR2868004 | Drought Stress (root) | 0.861 |
| SRR2967015 | Control (root) | 1.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 45.644 |
| SRR9715742 | Root | 31.580 |
| SRR9715743 | Root | 30.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.254 |
| SRR8749028 | MeJA induced 9h | 26.244 |
| SRR8749029 | MeJA induced 9h | 10.701 |
| SRR8749030 | Uninduced | 25.093 |
| SRR8749031 | Uninduced | 15.570 |
| SRR8749032 | Uninduced | 16.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.094 |
| SRR8400027 | Control - Root | 9.198 |