Gene detail information of Glyur000617s00023876 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006384178.1 | 2.12E-11 | hypothetical protein POPTR_0004s09260g, partial [Populus trichocarpa] |
| trEMBL | tr|K7N0H9|K7N0H9_SOYBN | 2.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G45460.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00617 | 73672 | 77262 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 70.890 |
| SRR1783600 | control | 71.053 |
| SRR1783602 | moderate drought stress | 109.555 |
| SRR1811619 | moderate drought stress | 108.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 122.738 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 121.998 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 203.723 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 197.272 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 117.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 116.915 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 50.058 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 49.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 76.614 |
| SRR2868004 | Drought Stress (root) | 84.083 |
| SRR2967015 | Control (root) | 63.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.791 |
| SRR9715740 | Leaf | 68.700 |
| SRR9715741 | Leaf | 71.498 |
| SRR9715739 | Root | 9.682 |
| SRR9715742 | Root | 41.898 |
| SRR9715743 | Root | 38.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 144.183 |
| SRR8749028 | MeJA induced 9h | 205.447 |
| SRR8749029 | MeJA induced 9h | 169.302 |
| SRR8749030 | Uninduced | 186.239 |
| SRR8749031 | Uninduced | 291.261 |
| SRR8749032 | Uninduced | 248.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 115.955 |
| SRR8400027 | Control - Root | 99.025 |