Gene detail information of Glyur000617s00023875 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004492977.1 | 3.47E-56 | PREDICTED: uncharacterized protein LOC101496069 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7KVA0|G7KVA0_MEDTR | 2.00E-55 | Transmembrane protein, putative {ECO:0000313|EMBL:AES80631.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00617 | 62810 | 65445 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.861 |
| SRR1783600 | control | 13.793 |
| SRR1783602 | moderate drought stress | 15.462 |
| SRR1811619 | moderate drought stress | 15.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.258 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.378 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.357 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.989 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.271 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 64.841 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.111 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.035 |
| SRR2868004 | Drought Stress (root) | 17.382 |
| SRR2967015 | Control (root) | 27.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 10.451 |
| SRR9715742 | Root | 3.357 |
| SRR9715743 | Root | 4.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 83.312 |
| SRR8749028 | MeJA induced 9h | 101.249 |
| SRR8749029 | MeJA induced 9h | 106.088 |
| SRR8749030 | Uninduced | 94.704 |
| SRR8749031 | Uninduced | 91.122 |
| SRR8749032 | Uninduced | 112.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.961 |
| SRR8400027 | Control - Root | 12.998 |