Gene detail information of Glyur000617s00023870 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN13923.1 | 6.60E-105 | hypothetical protein glysoja_016207 [Glycine soja] |
| trEMBL | tr|K7MVF5|K7MVF5_SOYBN | 1.00E-103 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G53020.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00617 | 25627 | 29456 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000617s00023870.1 | PF12874.2 | zf-met | 120 | 145 | 3.90E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.201 |
| SRR1783600 | control | 24.489 |
| SRR1783602 | moderate drought stress | 24.859 |
| SRR1811619 | moderate drought stress | 25.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.785 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.950 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.492 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.676 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.900 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.426 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.665 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.776 |
| SRR2868004 | Drought Stress (root) | 23.788 |
| SRR2967015 | Control (root) | 21.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.230 |
| SRR9715740 | Leaf | 3.592 |
| SRR9715741 | Leaf | 4.604 |
| SRR9715739 | Root | 4.140 |
| SRR9715742 | Root | 9.076 |
| SRR9715743 | Root | 8.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 87.367 |
| SRR8749028 | MeJA induced 9h | 39.796 |
| SRR8749029 | MeJA induced 9h | 80.484 |
| SRR8749030 | Uninduced | 24.970 |
| SRR8749031 | Uninduced | 22.439 |
| SRR8749032 | Uninduced | 31.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.661 |
| SRR8400027 | Control - Root | 19.543 |