Gene detail information of Glyur000615s00024008 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH25598.1 | 6.30E-13 | hypothetical protein MTR_6g028130 [Medicago truncatula] |
| trEMBL | tr|A0A072U911|A0A072U911_MEDTR | 2.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:KEH25598.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00615 | 57579 | 60968 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.496 |
| SRR1783600 | control | 45.199 |
| SRR1783602 | moderate drought stress | 59.685 |
| SRR1811619 | moderate drought stress | 57.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 74.631 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 76.268 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 104.532 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 99.694 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 106.492 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 108.332 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.770 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 52.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 118.150 |
| SRR2868004 | Drought Stress (root) | 131.650 |
| SRR2967015 | Control (root) | 119.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 44.973 |
| SRR9715740 | Leaf | 51.363 |
| SRR9715741 | Leaf | 37.911 |
| SRR9715739 | Root | 1.779 |
| SRR9715742 | Root | 11.750 |
| SRR9715743 | Root | 9.167 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 113.395 |
| SRR8749028 | MeJA induced 9h | 92.377 |
| SRR8749029 | MeJA induced 9h | 158.774 |
| SRR8749030 | Uninduced | 234.042 |
| SRR8749031 | Uninduced | 225.128 |
| SRR8749032 | Uninduced | 193.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 73.400 |
| SRR8400027 | Control - Root | 77.457 |