Gene detail information of Glyur000615s00023998 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G03860.1 | 6.00E-50 | APR-like 5 |
| NR | XP_004489697.1 | 3.63E-122 | PREDICTED: 5'-adenylylsulfate reductase-like 5-like [Cicer arietinum] |
| Swissprot | tr|Q93YX4|APRL5_ARATH | 7.00E-68 | 5'-adenylylsulfate reductase-like 5 (Precursor) |
| trEMBL | tr|G7KPL3|G7KPL3_MEDTR | 2.00E-121 | 5-adenylylsulfate reductase-like protein {ECO:0000313|EMBL:AES75170.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00615 | 8529 | 10761 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000615s00023998.1 | PF00085.15 | Thioredoxin | 21 | 98 | 9.20E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.896 |
| SRR1783600 | control | 7.378 |
| SRR1783602 | moderate drought stress | 8.847 |
| SRR1811619 | moderate drought stress | 8.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.831 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.070 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.961 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.648 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.717 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.573 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.476 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.057 |
| SRR2868004 | Drought Stress (root) | 29.642 |
| SRR2967015 | Control (root) | 29.235 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.132 |
| SRR9715740 | Leaf | 32.735 |
| SRR9715741 | Leaf | 30.648 |
| SRR9715739 | Root | 26.550 |
| SRR9715742 | Root | 29.488 |
| SRR9715743 | Root | 31.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.129 |
| SRR8749028 | MeJA induced 9h | 17.688 |
| SRR8749029 | MeJA induced 9h | 12.360 |
| SRR8749030 | Uninduced | 13.418 |
| SRR8749031 | Uninduced | 18.146 |
| SRR8749032 | Uninduced | 19.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.201 |
| SRR8400027 | Control - Root | 29.909 |