Gene detail information of Glyur000614s00017203 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33480.1 | 6.00E-26 | |
| NR | XP_003638243.1 | 9.71E-33 | hypothetical protein MTR_122s0066 [Medicago truncatula] |
| trEMBL | tr|G8A1P3|G8A1P3_MEDTR | 4.00E-33 | DUF3727 family protein {ECO:0000313|EMBL:AES72924.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00614 | 93402 | 95632 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000614s00017203.1 | PF12527.3 | DUF3727 | 6 | 78 | 9.60E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.986 |
| SRR1783600 | control | 1.230 |
| SRR1783602 | moderate drought stress | 0.537 |
| SRR1811619 | moderate drought stress | 0.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.804 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.512 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.311 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.002 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.375 |
| SRR2868004 | Drought Stress (root) | 3.679 |
| SRR2967015 | Control (root) | 2.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.081 |
| SRR9715740 | Leaf | 10.263 |
| SRR9715741 | Leaf | 4.257 |
| SRR9715739 | Root | 1.323 |
| SRR9715742 | Root | 1.451 |
| SRR9715743 | Root | 0.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.578 |
| SRR8749028 | MeJA induced 9h | 1.288 |
| SRR8749029 | MeJA induced 9h | 2.268 |
| SRR8749030 | Uninduced | 2.227 |
| SRR8749031 | Uninduced | 1.108 |
| SRR8749032 | Uninduced | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.587 |
| SRR8400027 | Control - Root | 5.289 |