Gene detail information of Glyur000614s00017199 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G09220.1 | 0 | amino acid permease 2 |
| NR | XP_003602669.1 | 0 | Amino acid permease [Medicago truncatula] |
| Swissprot | tr|Q38967|AAP2_ARATH | 0 | Amino acid permease 2 |
| trEMBL | tr|G8A1P0|G8A1P0_MEDTR | 0 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:AES72920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00614 | 67910 | 76935 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000614s00017199.1 | PF01490.13 | Aa_trans | 28 | 429 | 6.70E-108 |
| Glyur000614s00017199.1 | PF01490.13 | Aa_trans | 433 | 550 | 5.10E-33 |
| Glyur000614s00017199.2 | PF01490.13 | Aa_trans | 28 | 332 | 4.10E-80 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.379 |
| SRR1783600 | control | 4.131 |
| SRR1783602 | moderate drought stress | 6.609 |
| SRR1811619 | moderate drought stress | 6.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.981 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.962 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.449 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.130 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.350 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.369 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.740 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.576 |
| SRR2868004 | Drought Stress (root) | 14.639 |
| SRR2967015 | Control (root) | 9.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.543 |
| SRR9715740 | Leaf | 21.390 |
| SRR9715741 | Leaf | 57.323 |
| SRR9715739 | Root | 4.647 |
| SRR9715742 | Root | 13.469 |
| SRR9715743 | Root | 12.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.787 |
| SRR8749028 | MeJA induced 9h | 52.574 |
| SRR8749029 | MeJA induced 9h | 18.148 |
| SRR8749030 | Uninduced | 23.304 |
| SRR8749031 | Uninduced | 4.570 |
| SRR8749032 | Uninduced | 7.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.120 |
| SRR8400027 | Control - Root | 7.654 |