Gene detail information of Glyur000614s00017186 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25610.1 | 8.00E-09 | BURP domain-containing protein |
| NR | XP_007226278.1 | 4.39E-14 | hypothetical protein PRUPE_ppa019478mg, partial [Prunus persica] |
| Swissprot | tr|Q08298|RD22_ARATH | 5.00E-10 | Dehydration-responsive protein RD22 (Precursor) |
| trEMBL | tr|M5XN20|M5XN20_PRUPE | 2.00E-14 | Uncharacterized protein {ECO:0000313|EMBL:EMJ27477.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00614 | 5828 | 15332 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000614s00017186.1 | PF03181.10 | BURP | 2 | 62 | 5.60E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.086 |
| SRR1783600 | control | 27.119 |
| SRR1783602 | moderate drought stress | 28.294 |
| SRR1811619 | moderate drought stress | 34.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 86.372 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 93.489 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.252 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.992 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.400 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.813 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 57.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.201 |
| SRR2868004 | Drought Stress (root) | 0.223 |
| SRR2967015 | Control (root) | 0.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.219 |
| SRR9715740 | Leaf | 0.484 |
| SRR9715741 | Leaf | 0.891 |
| SRR9715739 | Root | 0.375 |
| SRR9715742 | Root | 0.245 |
| SRR9715743 | Root | 1.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.563 |
| SRR8749028 | MeJA induced 9h | 0.142 |
| SRR8749029 | MeJA induced 9h | 0.822 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.017 |
| SRR8749032 | Uninduced | 0.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.334 |
| SRR8400027 | Control - Root | 0.302 |