Gene detail information of Glyur000613s00030316


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45400.12.00E-73NAD(P)-binding Rossmann-fold superfamily protein
NRXP_003605087.18.16E-151Dihydroflavonol 4-reductase [Medicago truncatula]
COGYP_003514442.12.00E-20NAD-dependent epimerase/dehydratase [Stackebrandtia nassauensis DSM 44728]
Swissprottr|Q40316|VESTR_MEDSA1.00E-92Vestitone reductase
trEMBLtr|G7JDF6|G7JDF6_MEDTR3.00E-151Dihydroflavonol 4-reductase-like protein {ECO:0000313|EMBL:AES87284.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold006135663464753-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006694  steroid biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003854  3-beta-hydroxy-delta5-steroid dehydrogenase activity

GO:0016616  oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000613s00030316.1PF01073.143Beta_HSD141423.60E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.122
SRR1783600control2.218
SRR1783602moderate drought stress2.396
SRR1811619moderate drought stress2.395

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.030
DRR006520Root Summer glycyrrhizin high producing strain1.963
DRR006521Root Winter glycyrrhizin high producing strain0.914
DRR006522Root Winter glycyrrhizin high producing strain0.880
DRR006523Root Summer glycyrrhizin low producing strain1.684
DRR006524Root Summer glycyrrhizin low producing strain1.687
DRR006525Leaf Summer glycyrrhizin high producing strain0.324
DRR006526Leaf Summer glycyrrhizin high producing strain0.325

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)7.954
SRR2868004Drought Stress (root)6.613
SRR2967015Control (root)5.287

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf0.078
SRR9715740Leaf0.314
SRR9715741Leaf0.000
SRR9715739Root0.434
SRR9715742Root0.218
SRR9715743Root0.288

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.099
SRR8749028MeJA induced 9h8.920
SRR8749029MeJA induced 9h11.906
SRR8749030Uninduced8.795
SRR8749031Uninduced9.570
SRR8749032Uninduced6.042

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root3.558
SRR8400027Control - Root3.144