Gene detail information of Glyur000611s00026441 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004501252.1 | 1.59E-08 | PREDICTED: protein FAM32A-like [Cicer arietinum] |
| trEMBL | tr|G7JCC3|G7JCC3_MEDTR | 3.00E-08 | 7-dehydrocholesterol reductase {ECO:0000313|EMBL:AES73776.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00611 | 37351 | 41708 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.711 |
| SRR1783600 | control | 13.586 |
| SRR1783602 | moderate drought stress | 25.641 |
| SRR1811619 | moderate drought stress | 22.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.804 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.425 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.434 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.624 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.482 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.846 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.170 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.073 |
| SRR2868004 | Drought Stress (root) | 4.127 |
| SRR2967015 | Control (root) | 5.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.446 |
| SRR9715740 | Leaf | 1.668 |
| SRR9715741 | Leaf | 2.195 |
| SRR9715739 | Root | 10.516 |
| SRR9715742 | Root | 4.224 |
| SRR9715743 | Root | 4.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.184 |
| SRR8749028 | MeJA induced 9h | 2.674 |
| SRR8749029 | MeJA induced 9h | 1.974 |
| SRR8749030 | Uninduced | 2.184 |
| SRR8749031 | Uninduced | 0.363 |
| SRR8749032 | Uninduced | 0.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.953 |
| SRR8400027 | Control - Root | 15.065 |