Gene detail

Gene detail information of Glyur000610s00022585

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G22942.1	4.00E-22	G-protein gamma subunit 2
NR	XP_003590556.1	2.04E-52	hypothetical protein MTR_1g071100 [Medicago truncatula]
Swissprot	tr\|Q9FDX9\|GG1_ARATH	3.00E-31	Guanine nucleotide-binding protein subunit gamma 1 (Precursor)
trEMBL	tr\|G7ICP9\|G7ICP9_MEDTR	8.00E-53	Guanine nucleotide-binding protein subunit gamma 2 {ECO:0000313\|EMBL:AES60807.1}

Sequence

Transcript Sequence

>Glyur000610s00022585.1
AAGAAAAAAAAGGCAAGGGGAAAGGGAGTGACTTTTTCTTTTTATACGAATATACTAATAATTTAAGAAGTGCGCAGAGAAAAGTGGGAACGTTATAGACTATAACTATAGTATAGGAGTTGAGTTGAATTGAAATTGAACTGAATTGAGAGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGCCTTTTTTGTTTCTGTGGAATTGAGAGAGAGAGAGAGAGGTTTTTGAAGTTGTAGCTACTAGCTAGTAGGGGGCGTGTTATGAATGGATAGTGCCGTCTCTTACTGCGTCTGCCTTTAGATCTATTATCCTTATTCTTCTTTAATCAGAAATAGAGAAAGAGAAAAAAAAGGGGGAAGGGTTTTTTTTTTCTTTCTTTCTGCTGCATGAGTGTCCGCGATAGTCATGGCGTCTGAAACGGCGTCGTCGGTGGATGAAGAACACGCTGCTGCTGCTGCTGCTGCTGTGCAACCGTTGTCAACTGATAAAAGAGGTAAACATCGGATTGTTGCGGAATTGAAGCGTCTCCAACAAGACTCCAAATTCCTTGAGGAAGAATTGGAAGAGCTTGAGAAAACAGAAAATGTGTCAACCATATGCATGGATTTGCTGAAAGACGTAGAAAGTAGACCTGATCCACTGCTCCCTGAAATACATGGACCTGTAAATCTGTTATGGGATAGATGGTTTGAAGGGCCTCAGGATCCAGACACTTGTAGATGTTTGATACTTTGATTTGAAGCGTTGAAACTATATAAAATGCCGCCACACTTACTGCACAGTAGTGAGTCTGGAAATGTTTGATGACATTTTATACCATGTAAAATAGTTCTTTAATGGGTTCTTGGTTTACATTTTACAACATACAGGATGTTGCTTTGAATACCGTCTGTGTAGAATCACATTTGAGAAGGATTATTATTTTGTGCTTATACCAGGGCACATATAGTCAGAAGCTAACTGAGAATGCCCTTGGTGATAAATGGTATGGCCTTAAGGGTCAACCTGGAGAAATTATGTCAACAGTGTTCAGCCAAGGAGGTGAAATTTGGGAAGGTCCGAAAATGGTTATATGAATTGTCAAGTAAATCTGAATGAGGATGAGAATTTTCTGGTAGACCTCATAGGGGTTGGCAAGGCGAAAATTGAGCACATATCCCTCAAACTTACATGTACATTTGTTAGTGTATCATTTATCAAACCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00610	98039	100721	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007186 G-protein coupled receptor signaling pathway

cellular_component
GO:0005834 heterotrimeric G-protein complex

molecular_function
GO:0004871 signal transducer activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000610s00022585.1	PF00631.17	G-gamma	38	109	1.20E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.426
SRR1783600	control	6.272
SRR1783602	moderate drought stress	5.037
SRR1811619	moderate drought stress	5.236

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.959
DRR006520	Root Summer glycyrrhizin high producing strain	12.311
DRR006521	Root Winter glycyrrhizin high producing strain	9.884
DRR006522	Root Winter glycyrrhizin high producing strain	9.298
DRR006523	Root Summer glycyrrhizin low producing strain	14.225
DRR006524	Root Summer glycyrrhizin low producing strain	15.427
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.608
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.608

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.295
SRR2868004	Drought Stress (root)	15.897
SRR2967015	Control (root)	17.054

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.790
SRR9715740	Leaf	7.006
SRR9715741	Leaf	6.738
SRR9715739	Root	3.674
SRR9715742	Root	5.848
SRR9715743	Root	5.077

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.903
SRR8749028	MeJA induced 9h	4.348
SRR8749029	MeJA induced 9h	3.516
SRR8749030	Uninduced	3.457
SRR8749031	Uninduced	1.296
SRR8749032	Uninduced	2.068

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.670
SRR8400027	Control - Root	15.579