Gene detail information of Glyur000610s00022580 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51510.1 | 5.00E-42 | |
| NR | NP_001237007.1 | 7.14E-76 | uncharacterized protein LOC100306066 [Glycine max] |
| trEMBL | tr|C6SXT6|C6SXT6_SOYBN | 3.00E-76 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU14059.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00610 | 61243 | 62628 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.700 |
| SRR1783600 | control | 0.727 |
| SRR1783602 | moderate drought stress | 1.083 |
| SRR1811619 | moderate drought stress | 1.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.090 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.268 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.260 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.876 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.987 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.193 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.946 |
| SRR2868004 | Drought Stress (root) | 6.227 |
| SRR2967015 | Control (root) | 5.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.700 |
| SRR9715740 | Leaf | 65.674 |
| SRR9715741 | Leaf | 38.123 |
| SRR9715739 | Root | 2.600 |
| SRR9715742 | Root | 1.605 |
| SRR9715743 | Root | 1.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.814 |
| SRR8749028 | MeJA induced 9h | 5.272 |
| SRR8749029 | MeJA induced 9h | 4.974 |
| SRR8749030 | Uninduced | 0.675 |
| SRR8749031 | Uninduced | 0.136 |
| SRR8749032 | Uninduced | 2.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.963 |
| SRR8400027 | Control - Root | 2.848 |