Gene detail information of Glyur000610s00022572 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02590.2 | 2.00E-84 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003554277.1 | 2.75E-176 | PREDICTED: transcription factor UNE12-like isoform X1 [Glycine max] |
| Swissprot | tr|O22768|UNE12_ARATH | 1.00E-125 | Transcription factor UNE12 |
| trEMBL | tr|I1N9L8|I1N9L8_SOYBN | 1.00E-176 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G34360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00610 | 15383 | 20549 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
| EAR motif-containing Proteins | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000610s00022572.1 | PF00010.21 | HLH | 140 | 184 | 2.30E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 99.129 |
| SRR1783600 | control | 98.018 |
| SRR1783602 | moderate drought stress | 155.785 |
| SRR1811619 | moderate drought stress | 154.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 103.065 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 101.819 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.873 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 37.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 94.491 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 95.288 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.865 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 53.437 |
| SRR2868004 | Drought Stress (root) | 69.470 |
| SRR2967015 | Control (root) | 91.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.162 |
| SRR9715740 | Leaf | 26.729 |
| SRR9715741 | Leaf | 37.099 |
| SRR9715739 | Root | 49.729 |
| SRR9715742 | Root | 92.874 |
| SRR9715743 | Root | 77.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.759 |
| SRR8749028 | MeJA induced 9h | 35.769 |
| SRR8749029 | MeJA induced 9h | 45.873 |
| SRR8749030 | Uninduced | 38.449 |
| SRR8749031 | Uninduced | 14.855 |
| SRR8749032 | Uninduced | 20.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 112.821 |
| SRR8400027 | Control - Root | 88.682 |