Gene detail information of Glyur000609s00035423 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38280.1 | 9.00E-25 | |
| NR | XP_003526762.1 | 0 | PREDICTED: uncharacterized protein LOC100803861 isoform X1 [Glycine max] |
| trEMBL | tr|I1K6V1|I1K6V1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G00260.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00609 | 35916 | 55389 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.660 |
| SRR1783600 | control | 14.246 |
| SRR1783602 | moderate drought stress | 12.608 |
| SRR1811619 | moderate drought stress | 12.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.779 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.163 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.228 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.852 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.690 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.261 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.983 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.052 |
| SRR2868004 | Drought Stress (root) | 15.985 |
| SRR2967015 | Control (root) | 17.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.195 |
| SRR9715740 | Leaf | 10.916 |
| SRR9715741 | Leaf | 13.097 |
| SRR9715739 | Root | 1.964 |
| SRR9715742 | Root | 7.380 |
| SRR9715743 | Root | 6.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.196 |
| SRR8749028 | MeJA induced 9h | 7.412 |
| SRR8749029 | MeJA induced 9h | 3.333 |
| SRR8749030 | Uninduced | 5.864 |
| SRR8749031 | Uninduced | 3.767 |
| SRR8749032 | Uninduced | 1.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.943 |
| SRR8400027 | Control - Root | 17.264 |