Gene detail information of Glyur000608s00025889 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70420.1 | 1.00E-42 | Protein of unknown function (DUF1645) |
| NR | XP_004489836.1 | 2.47E-97 | PREDICTED: uncharacterized protein LOC101498003 [Cicer arietinum] |
| trEMBL | tr|I1JC29|I1JC29_SOYBN | 4.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G04000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00608 | 122114 | 122851 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000608s00025889.1 | PF07816.6 | DUF1645 | 63 | 223 | 7.40E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.763 |
| SRR1783600 | control | 1.819 |
| SRR1783602 | moderate drought stress | 2.972 |
| SRR1811619 | moderate drought stress | 2.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 110.960 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 108.107 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.384 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.476 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 78.640 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 79.446 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.579 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.716 |
| SRR2868004 | Drought Stress (root) | 59.978 |
| SRR2967015 | Control (root) | 134.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 288.072 |
| SRR9715740 | Leaf | 129.631 |
| SRR9715741 | Leaf | 268.185 |
| SRR9715739 | Root | 150.738 |
| SRR9715742 | Root | 160.479 |
| SRR9715743 | Root | 142.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 143.818 |
| SRR8749028 | MeJA induced 9h | 173.354 |
| SRR8749029 | MeJA induced 9h | 235.345 |
| SRR8749030 | Uninduced | 117.181 |
| SRR8749031 | Uninduced | 193.017 |
| SRR8749032 | Uninduced | 171.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.688 |
| SRR8400027 | Control - Root | 54.011 |