Gene detail information of Glyur000607s00021614 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32590.1 | 3.00E-45 | 2Fe-2S ferredoxin-like superfamily protein |
| NR | XP_003550159.1 | 1.73E-81 | PREDICTED: uncharacterized protein LOC100807125 isoform X1 [Glycine max] |
| COG | YP_001516354.1 | 3.00E-22 | 2Fe-2S type ferredoxin [Acaryochloris marina MBIC11017] |
| trEMBL | tr|I1MWM4|I1MWM4_SOYBN | 6.00E-82 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G30770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00607 | 87404 | 90050 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000607s00021614.1 | PF00111.22 | Fer2 | 89 | 137 | 7.70E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.784 |
| SRR1783600 | control | 10.104 |
| SRR1783602 | moderate drought stress | 13.736 |
| SRR1811619 | moderate drought stress | 13.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.283 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.639 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.060 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.479 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.980 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.943 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 40.971 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.364 |
| SRR2868004 | Drought Stress (root) | 22.165 |
| SRR2967015 | Control (root) | 21.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.739 |
| SRR9715740 | Leaf | 92.779 |
| SRR9715741 | Leaf | 47.072 |
| SRR9715739 | Root | 11.279 |
| SRR9715742 | Root | 10.441 |
| SRR9715743 | Root | 10.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.424 |
| SRR8749028 | MeJA induced 9h | 7.296 |
| SRR8749029 | MeJA induced 9h | 4.797 |
| SRR8749030 | Uninduced | 11.216 |
| SRR8749031 | Uninduced | 6.987 |
| SRR8749032 | Uninduced | 8.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.522 |
| SRR8400027 | Control - Root | 55.180 |