Gene detail

Gene detail information of Glyur000607s00021604

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25680.1	1.00E-147	molybdate transporter 1
NR	XP_007161272.1	0	hypothetical protein PHAVU_001G056300g [Phaseolus vulgaris]
COG	YP_004180804.1	1.00E-74	sulfate transporter [Isosphaera pallida ATCC 43644]
Swissprot	tr\|Q9SL95\|MOT1_ARATH	0	Molybdate transporter 1
trEMBL	tr\|V7CWH7\|V7CWH7_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW33266.1}

Sequence

Transcript Sequence

>Glyur000607s00021604.1
CCACATTACCTCAGAAAGGTGAGTACACAATCTTCCATGGCAAACCAAAACCTTCCTCCAATTTCAATCTCAGACCCTGAAACCACCCCAACCACAGCTTTCTCAGCCAACGTGATCGTCCAGAAAGTGAAAACCAACTTGGTTTTACGTTCAAAATGGGCTGAACTGAACGGTGCCATGGGTGACCTTGGTACCTACATACCCATAATCCTTGCCTTGACCCTATCAAGGGACCTCAACCTTGGCACCACATTGATCTTTACAGGTATCTACAACATCATCACTGGTGTCATTTATGGGGTTCCTATGCCTGTCCAGCCCATGAAGTCCATCGCGGCCGAGGCCTTATCGGATGCCACCTTTGCCGTGCCGGAGATGATGGCCGCCGGCATAATGACTGGCGGCGTGTCTCTCTTTCTGGGTGTCACCGGGTTGATGCAGCTGGTGTACAAGTTGATTCCTTTATGTGTAGTGCGGGGGATTCAGCTAGCACAGGGTTTGTCCTTTGCTTTGACAGCAGTTAAATACGTGAGGAAAATGCAAGATCTTCCTAAGTCTAAAGCTTTGGGTAATAGGCATTGGTTTGGGTTGGATGGGTTGGTTTTGGCCATTGTTTGTCTTATTTTTATTGTTATTGTGAATGGTGCTGGTGAGGGTGACCATCATGGGTGTTGTGATGGTGGTGCAGAAAGTGGTGATTTGGGTGGACAGAGGAGGGTTGATCAGGGTGATAAAAACAGGACAAGTAGATTGCGGAAGATTGTTTTTTCACTTCCTTCTGCTTTTATAATCTTTGTGTTGGGTGTTGTTTTGGCCTTCATAAAAAGGCCTCAAGTGGTTCATGAAATCAAGTTTGGACCCTCTTCCATGGAAGTGGTGAAATTCACTAGGCANGCATGGAAGAAAGGTTTTGTCAAAGGTACAATTCCTCAACTCCCATTGACAATTCTGAANTCTGTGATAGCTGTTTGCAAGNTGTCATCNGATCTGTTCCCAGGAAGGGAATTTTCAGTTACCTCAATTTCAGTTACTGTTGGGTTGATGAACTTGTTTGGTAGTTGGTTTGGTGCCATGCCATGTTGCCATGGCGCTGGTGGACTTGCAGGACAGTACAAGTTTGGTGGAAGGAGTGGAGGGTGCGTGGCACTTCTTGGTGCTGCCAAATTGGTATTGGGATTGGTGTTGGGGNCTTCTTTGGCACACATTTTAAGGCAGTTCCCAGTGGGGATCTTAGGTGTGTTGCTCCTGTTTGCTGGAATTGAATTAGCTATGTGCTGTAGGGACATAAAAACCAAGGAAGACTCCTTTGTGATGCTTGTTTGCACTGCTGTTTCACTAGTGGGGTCAAGTGCTGCACTTGGCTTTTTGTGTGGGATGGTTATGCATATGCTTCTTAGGCTAAGGAATTGGACAAAGGATAAACCATTTTCTACCATATGGGTGCATAAAAGCCCTGAGCAACTCTGAAGATTAATTAAAAGAGCATTGTATCTATGGAATAATTATTATAATGTATGACTTTCATAAATGATGTTTCTGAAAGTGTTTTTCTTTGTTTTCTTTTTATCAATTTCTTAGCATTTGATGCTAAATAAGGGGTTGTTTGAGAACTTAATGCTAGCTGTAGTCAGTACTCAGTAGAACTTCAGATGTTGATGGCTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00607	16232	18237	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0008272 sulfate transport

GO:0015689 molybdate ion transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0015098 molybdate ion transmembrane transporter activity

GO:0015116 sulfate transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000607s00021604.1	PF00916.15	Sulfate_transp	242	411	3.00E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.548
SRR1783600	control	0.375
SRR1783602	moderate drought stress	0.349
SRR1811619	moderate drought stress	0.304

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.184
DRR006520	Root Summer glycyrrhizin high producing strain	3.947
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	5.601
DRR006524	Root Summer glycyrrhizin low producing strain	5.971
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.020
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.871

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.362
SRR2868004	Drought Stress (root)	3.412
SRR2967015	Control (root)	3.362

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.218
SRR9715740	Leaf	0.623
SRR9715741	Leaf	0.410
SRR9715739	Root	3.144
SRR9715742	Root	3.736
SRR9715743	Root	3.159

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.001

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.848
SRR8400027	Control - Root	2.560