Gene detail

Gene detail information of Glyur000607s00021603

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21270.1	8.00E-158	wall-associated kinase 2
NR	KEH40344.1	0	wall-associated receptor kinase-like protein [Medicago truncatula]
COG	YP_001958461.1	1.00E-27	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMP1\|WAK2_ARATH	0	Wall-associated receptor kinase 2 (Precursor)
trEMBL	tr\|A0A072VEB7\|A0A072VEB7_MEDTR	0	Wall-associated receptor kinase-like protein {ECO:0000313\|EMBL:KEH40344.1}

Sequence

Transcript Sequence

>Glyur000607s00021603.1
TACAGTGCTAACTCAAAGCAAGCAAGAAAGATCCATATATTGTCTCTTCCAAATTAAGGCCTATTTTCTAGTGTTTTTTGTGATTGAATTGAAGGTGGACAATATGAAAGTGAAGGAGAAGANGCACAGTACGCAACTGTTGATAATGTTTGCATATTTAGCCTTGCAGGTGGTAGGAGCAGTAGTTGCAGCTGATGATCAACCCCTTTCTCCAGCACCAGCACCAGCACCAGAACTAGCACCAGCACCAGCACTGACCTCGAANCAATTAGCCCTGCCTGGTTGCCCTTCCACCTGTGGAGGTGTAGAAATCCCATACCCATTTGGCATAGGCAATTCATCTGCACCTGGTGATAGTCAAACACCCTGTTACTTGGAGGACAGATTTAATCTCACTTGCAATCACTCCAAATTATATAGGGGTAAGGGTAACATACAAATCTTAAACATAGACATCCTCCAAGGTCAAATGGACGTGTCNTTTTTTGTCGCACAGCATTGCAATATTATTACAGATCACAACAATCGTCCCACGCTCTACACTTCGTTGAGCATTTCAAGGAAGGAAAACAAGTTCGTGACTATAGGCTGCGACAGTTATGGTTTTCTCAATAGCTTTGTTGGCAATCACACATATTCAACAGGGTGCATAACACGGTGTGATGGCAACGACAGAAGTAGGATCGAGAACGGAACGTGTTCGGGTATAGGGTGTTGCCAGGTGGACATTCCTNCTAGGATGAGCAATATCAGCATAGAAGCTAAAACCTTCTCCAGTTCAAAGGAATCTCAGGAAGTGGAAACCTGCACCTATTCCTTCGTTGTCAAGAAAGACAAGTACACTTTTTCATCCAGTGATTTAGAACAAGGTTTTCCTCCCAACAAGAAACTCCCCGTGGTTTTTGATTGGACCGTAGGAAACCGGAGCTGTAGTGTTGCTTCCCATAGTGGAGTTGACTACGCGTGCAGGGCCAATAGCCATTGCAATGACGCGGACACGTATTATGGTTACCGATGCAGATGCAATCAAGGTTACGAAGGAAACCCGTACCATCCCGATGGCTGCACAGACATAGACGAATGTGAGAGGGGAAGTCATAGATGCATAAGCAAAGATAATTGTATCAACACCGATGGGAATCACACATGTTTCTGTCCTGAGGGGCAATATGGAGATGGAACAAAGGAAGGAACTCGGTGCTACCGACATAATGTGTACATGAAGATTGTCATCGGAGCTGGAATAGGAGTTATTGTTCTATTTGTAGGGACTACCTCACTATTCTTGATGTACCAGAAAAGGAAACTCATCAAAATGAGAGAGAATTTCTTTCAACAAAATGGCGGTTTCTTATTGAAACAACAAATCTCTAAAAGAAAAGACTCCTCCCAAATTGCTCAAATTTTCACAGAGGAAGAACTAAATAAGGCCACCAACAACTTTGACGAGAGGTTAATCATTGGCAGAGGTGGTTTTGGCACCGTTTACAAAGGATTTCTACCAAATAAAACAATCATTGCTGTCAAGAAGTCCAAAACAACGGATGCGAGCCAAATCGGGCAGTTCATTAACGAGGTGGATGTCCTCCTCCAAATAAACCATAGGAATGTGGTTAAACTCTTGGGGTGTTGTTTAGAGACAAAGGTTCCTTTGTTGGTTTATGAATTTGTGAGCAATGGTACTCTATTTGAATTTTTACACACAAAAGGTAAGGCGAATAATGCAACATGGAACATTCGTCTAAGGATAGCAGCAGAGGTAGCTGGAGCTCTGTCATATCTGCATTCATCTGTCTCAATACCCATTATCCACAGCGATGTGAAGAGTGCCAACATTCTATTGGATGACACTTACACTGCAAAAGTGTCTGATTTCGGAGCTTCAAGATTGGTTCCCCTTGATCAAATTGAAATAGCCGCAGTGGTGCAAGGGACTATTGGCTACTTAGACCCAGAGTATATGCAGACAAACCAATTGACTGAGAAAAGTGATGTGTATAGCTTTGGGGTAGTGCTTGTGGAGCTGCTAACAGGGGAGAAACCTTTTCCCTCTGTTAGGAAAGAAGAGAAAGAGACAAGAAGTCTTGCTATGCAATTTCTATCTTGCTTAAAAGAGGATCGTGTTTTTGGAGTTATTCAAGATAGCATCTTGAACGAAAAAAATAAGCAGGAGATCAAGGAGGTTGCTATTCTTGCAGCAGAGTGCTTGAGACTTCAAGGGGAGGCAAGACCTACCATGAAAGAAGTGGCTATGGAGTTAGAGGGAATTATGAGGTCAACGGAGAAGCATTCTTGGATCAATTCAGACATAAATTTAGAGGAGACTCGGTACTTGCTTCATGAAGCATCATCATCTAGTACTTATGAACTTGGTCATGACAGCAAGCATGGATATAGTGGGTGTGATAGCTTGAAAGATCATGTACAACTGGTTGACATGGATGATGGAAGATGATTTATATGACATGCATATATAGCAGCATACACTCCATGTAATTATATATATCCATGATTTGCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00607	11158	13958	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000607s00021603.1	PF13947.1	GUB_WAK_bind	59	164	1.10E-21
Glyur000607s00021603.1	PF07645.10	EGF_CA	323	364	2.00E-06
Glyur000607s00021603.1	PF00069.20	Pkinase	452	715	1.40E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.480
SRR1783600	control	0.498
SRR1783602	moderate drought stress	1.373
SRR1811619	moderate drought stress	1.303

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.094
DRR006520	Root Summer glycyrrhizin high producing strain	1.064
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.219
DRR006524	Root Summer glycyrrhizin low producing strain	0.219
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.718
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.122

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.025
SRR2868004	Drought Stress (root)	0.137
SRR2967015	Control (root)	0.111

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.692
SRR9715740	Leaf	0.953
SRR9715741	Leaf	0.594
SRR9715739	Root	0.089
SRR9715742	Root	1.462
SRR9715743	Root	1.086

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.738
SRR8749028	MeJA induced 9h	1.568
SRR8749029	MeJA induced 9h	1.691
SRR8749030	Uninduced	5.552
SRR8749031	Uninduced	1.133
SRR8749032	Uninduced	0.415

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.133
SRR8400027	Control - Root	0.793