Gene detail information of Glyur000606s00017345 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28940.1 | 5.00E-116 | Phosphorylase superfamily protein |
| NR | KHN18182.1 | 0 | Bark storage protein A [Glycine soja] |
| COG | NP_421069.1 | 4.00E-42 | phosphorylase [Caulobacter crescentus CB15] |
| Swissprot | tr|Q07469|BSPA_POPDE | 3.00E-37 | Bark storage protein A (Precursor) |
| trEMBL | tr|I1K9C4|I1K9C4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00606 | 103307 | 106855 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000606s00017345.1 | PF01048.15 | PNP_UDP_1 | 48 | 345 | 2.50E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 374.569 |
| SRR1783600 | control | 376.069 |
| SRR1783602 | moderate drought stress | 207.872 |
| SRR1811619 | moderate drought stress | 207.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 341.269 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 339.405 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.160 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.148 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.404 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.439 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 251.691 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 250.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1174.869 |
| SRR2868004 | Drought Stress (root) | 341.389 |
| SRR2967015 | Control (root) | 839.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 489.375 |
| SRR9715740 | Leaf | 57.859 |
| SRR9715741 | Leaf | 159.946 |
| SRR9715739 | Root | 249.779 |
| SRR9715742 | Root | 1393.815 |
| SRR9715743 | Root | 1143.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 312.183 |
| SRR8400027 | Control - Root | 243.649 |