Gene detail information of Glyur000605s00024911 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32950.1 | 0 | Subtilase family protein |
| NR | XP_003524182.2 | 0 | PREDICTED: subtilisin-like protease SDD1-like isoform X1 [Glycine max] |
| COG | YP_004097803.1 | 5.00E-100 | peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043] |
| Swissprot | tr|Q9MAP5|SBT33_ARATH | 0 | Subtilisin-like protease SBT3.3 {ECO:0000303|PubMed:16193095} (Precursor) |
| trEMBL | tr|K7KQC7|K7KQC7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G28370.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00605 | 21748 | 26172 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000605s00024911.1 | PF05922.11 | Inhibitor_I9 | 42 | 121 | 2.80E-17 |
| Glyur000605s00024911.1 | PF00082.17 | Peptidase_S8 | 152 | 595 | 1.70E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.076 |
| SRR1783600 | control | 46.506 |
| SRR1783602 | moderate drought stress | 36.841 |
| SRR1811619 | moderate drought stress | 36.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.592 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.385 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.483 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.505 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.146 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.514 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.784 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.237 |
| SRR2868004 | Drought Stress (root) | 35.011 |
| SRR2967015 | Control (root) | 39.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.860 |
| SRR9715740 | Leaf | 7.299 |
| SRR9715741 | Leaf | 10.626 |
| SRR9715739 | Root | 1.854 |
| SRR9715742 | Root | 9.554 |
| SRR9715743 | Root | 8.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.124 |
| SRR8749028 | MeJA induced 9h | 0.055 |
| SRR8749029 | MeJA induced 9h | 0.040 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.078 |
| SRR8749032 | Uninduced | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.565 |
| SRR8400027 | Control - Root | 20.831 |