Gene detail information of Glyur000604s00024574 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16110.1 | 1.00E-42 | |
| NR | XP_004516673.1 | 3.81E-95 | PREDICTED: uncharacterized protein LOC101507704 [Cicer arietinum] |
| trEMBL | tr|V7C438|V7C438_PHAVU | 7.00E-83 | Uncharacterized protein {ECO:0000313|EMBL:ESW23646.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00604 | 129669 | 132569 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 71.378 |
| SRR1783600 | control | 71.345 |
| SRR1783602 | moderate drought stress | 107.368 |
| SRR1811619 | moderate drought stress | 106.974 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 95.085 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 95.111 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.739 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 170.716 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 170.085 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.910 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.912 |
| SRR2868004 | Drought Stress (root) | 52.480 |
| SRR2967015 | Control (root) | 66.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.974 |
| SRR9715740 | Leaf | 26.094 |
| SRR9715741 | Leaf | 27.804 |
| SRR9715739 | Root | 43.899 |
| SRR9715742 | Root | 29.351 |
| SRR9715743 | Root | 29.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.465 |
| SRR8749028 | MeJA induced 9h | 40.450 |
| SRR8749029 | MeJA induced 9h | 45.646 |
| SRR8749030 | Uninduced | 16.672 |
| SRR8749031 | Uninduced | 18.704 |
| SRR8749032 | Uninduced | 40.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 63.882 |
| SRR8400027 | Control - Root | 55.339 |