Gene detail information of Glyur000602s00018900 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24450.1 | 1.00E-26 | Heavy metal transport/detoxification superfamily protein |
| NR | XP_004503430.1 | 1.65E-66 | PREDICTED: uncharacterized protein LOC101493106 [Cicer arietinum] |
| trEMBL | tr|G7L8Z8|G7L8Z8_MEDTR | 6.00E-63 | Heavy metal transport/detoxification superfamily protein {ECO:0000313|EMBL:AET05298.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00602 | 42899 | 44045 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.915 |
| SRR1783600 | control | 1.798 |
| SRR1783602 | moderate drought stress | 1.457 |
| SRR1811619 | moderate drought stress | 1.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.108 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.188 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.403 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.400 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.316 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.596 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.655 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.742 |
| SRR2868004 | Drought Stress (root) | 27.225 |
| SRR2967015 | Control (root) | 16.937 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.241 |
| SRR9715740 | Leaf | 0.874 |
| SRR9715741 | Leaf | 0.785 |
| SRR9715739 | Root | 0.120 |
| SRR9715742 | Root | 0.540 |
| SRR9715743 | Root | 0.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.105 |
| SRR8749028 | MeJA induced 9h | 0.162 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.166 |
| SRR8749031 | Uninduced | 0.668 |
| SRR8749032 | Uninduced | 0.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.871 |
| SRR8400027 | Control - Root | 23.502 |