Gene detail information of Glyur000600s00022491


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40840.10disproportionating enzyme 2
NRAES81107.204-alpha-glucanotransferase DPE2 [Medicago truncatula]
COGYP_004444832.104-alpha-glucanotransferase [Haliscomenobacter hydrossis DSM 1100]
Swissprottr|Q8RXD9|DPE2_ARATH04-alpha-glucanotransferase DPE2
trEMBLtr|G7L4U3|G7L4U3_MEDTR04-alpha-glucanotransferase DPE2 {ECO:0000313|EMBL:AES81107.2}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0060091692101123-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM20,CBM20,GH77


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K00705malQEC:2.4.1.25Starch and sucrose metabolismmap00500
Starch and sucrose metabolismmap00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004134  4-alpha-glucanotransferase activity

GO:0030246  carbohydrate binding

GO:2001070  starch binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000600s00022491.1PF00686.14CBM_20161086.20E-21
Glyur000600s00022491.1PF02446.12Glyco_hydro_772528985.60E-198
Glyur000600s00022491.2PF00686.14CBM_20161086.20E-21
Glyur000600s00022491.2PF02446.12Glyco_hydro_772528985.60E-198


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control234.817
SRR1783600control235.557
SRR1783602moderate drought stress189.331
SRR1811619moderate drought stress188.246

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain126.574
DRR006520Root Summer glycyrrhizin high producing strain125.572
DRR006521Root Winter glycyrrhizin high producing strain44.283
DRR006522Root Winter glycyrrhizin high producing strain43.258
DRR006523Root Summer glycyrrhizin low producing strain94.692
DRR006524Root Summer glycyrrhizin low producing strain94.439
DRR006525Leaf Summer glycyrrhizin high producing strain158.754
DRR006526Leaf Summer glycyrrhizin high producing strain158.710

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)37.114
SRR2868004Drought Stress (root)20.575
SRR2967015Control (root)33.850

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf55.413
SRR9715740Leaf97.921
SRR9715741Leaf57.357
SRR9715739Root25.141
SRR9715742Root184.421
SRR9715743Root152.574

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.005
SRR8749028MeJA induced 9h17.416
SRR8749029MeJA induced 9h8.796
SRR8749030Uninduced4.183
SRR8749031Uninduced1.040
SRR8749032Uninduced2.794

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root208.653
SRR8400027Control - Root272.296

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved