Gene detail information of Glyur000599s00030429 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26960.1 | 1.00E-29 | Pollen Ole e 1 allergen and extensin family protein |
| NR | XP_003549067.1 | 2.12E-78 | PREDICTED: major pollen allergen Ole e 1-like [Glycine max] |
| trEMBL | tr|I1MLE9|I1MLE9_SOYBN | 8.00E-79 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G05760.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00599 | 133234 | 134798 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000599s00030429.1 | PF01190.12 | Pollen_Ole_e_I | 27 | 101 | 2.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.320 |
| SRR1783600 | control | 43.583 |
| SRR1783602 | moderate drought stress | 24.398 |
| SRR1811619 | moderate drought stress | 24.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 98.689 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 97.098 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.661 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 81.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 79.390 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.126 |
| SRR2868004 | Drought Stress (root) | 14.764 |
| SRR2967015 | Control (root) | 13.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.194 |
| SRR9715740 | Leaf | 5.362 |
| SRR9715741 | Leaf | 3.035 |
| SRR9715739 | Root | 22.483 |
| SRR9715742 | Root | 27.242 |
| SRR9715743 | Root | 27.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.123 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 93.008 |
| SRR8400027 | Control - Root | 110.624 |