Gene detail information of Glyur000598s00025088.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25190.1 | 5.00E-35 | Integrase-type DNA-binding superfamily protein |
| NR | NP_001235035.1 | 1.92E-75 | uncharacterized protein LOC100527365 [Glycine max] |
| Swissprot | tr|Q94AW5|ERF03_ARATH | 7.00E-64 | Ethylene-responsive transcription factor ERF003 |
| trEMBL | tr|C6T440|C6T440_SOYBN | 7.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G23160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00598 | 45135 | 46235 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000598s00025088.1 | PF00847.15 | AP2 | 7 | 53 | 2.80E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.958 |
| SRR1783600 | control | 3.843 |
| SRR1783602 | moderate drought stress | 8.581 |
| SRR1811619 | moderate drought stress | 8.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.421 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.462 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.572 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.669 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.517 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.314 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.604 |
| SRR2868004 | Drought Stress (root) | 4.985 |
| SRR2967015 | Control (root) | 7.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.494 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.077 |
| SRR9715742 | Root | 0.920 |
| SRR9715743 | Root | 0.535 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.018 |
| SRR8749028 | MeJA induced 9h | 35.305 |
| SRR8749029 | MeJA induced 9h | 20.789 |
| SRR8749030 | Uninduced | 9.321 |
| SRR8749031 | Uninduced | 19.616 |
| SRR8749032 | Uninduced | 10.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.710 |
| SRR8400027 | Control - Root | 2.349 |