Gene detail information of Glyur000598s00025087 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80730.1 | 9.00E-30 | zinc-finger protein 1 |
| NR | XP_003546916.1 | 2.09E-60 | PREDICTED: zinc finger protein 1-like [Glycine max] |
| Swissprot | tr|Q42485|ZFP1_ARATH | 1.00E-35 | Zinc finger protein 1 |
| trEMBL | tr|K7M8Q8|K7M8Q8_SOYBN | 8.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G00645.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00598 | 36980 | 39120 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.114 |
| SRR1783600 | control | 5.384 |
| SRR1783602 | moderate drought stress | 2.858 |
| SRR1811619 | moderate drought stress | 2.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.444 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.491 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.912 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.955 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.522 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.542 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.917 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.983 |
| SRR2868004 | Drought Stress (root) | 1.983 |
| SRR2967015 | Control (root) | 1.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.193 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.153 |
| SRR9715739 | Root | 0.217 |
| SRR9715742 | Root | 0.979 |
| SRR9715743 | Root | 0.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.844 |
| SRR8749028 | MeJA induced 9h | 0.367 |
| SRR8749029 | MeJA induced 9h | 0.366 |
| SRR8749030 | Uninduced | 0.414 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.627 |
| SRR8400027 | Control - Root | 5.585 |